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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015875479.1_cds_XP_016435822.1_31743
CDS Infomation

[gene=LOC107762027] [db_xref=GeneID:107762027] [protein=polycomb group protein EMBRYONIC FLOWER 2-like] [protein_id=XP_016435822.1] [location=join(6074..6108,6237..6405,6866..6921,8092..8209,8294..8453,8535..8576,9665..9812,10585..10592,12134..12195,12304..12425,13231..13295,14066..14118,14264..14317,14403..14462,14889..14935,15038..15159,19156..19342,20416..20464,23013..23096,25009..25088,26192..26281,26784..26907)] [gbkey=CDS]
Sequence

ATGCCAGGCATACCTTTAGTGGCTCGTGAAACCACGCATTACACTTGCTACTGCAGTTAC
TCTACAGTTACGGACTCAATGTGCAGGCAAGATTCTGCTACACATTTGTCTGCAGAGGAG
AAGATTGCTGCTGAAGAAAGCCTTTCAACTTATTGCAAACCTGTTGAACTCTACAACATT
CTCCAACGCCGTGCCGTTAGAAATCCTTCCTTCCTTCAAAGATGTTTACAATACAAAATT
CAAGCAAAGCACAAAAGGAGGATTCAAATGGCAATATCTGTACCAGCAACTGTGAACGAT
GAATCACAGGTCCAGAATGTTTTTCCTCTGTGTGTAATTTTGGCAAGGCCAGTATCAAAT
GCTGCAGGTGCTGAGGCACATTCTGCTGTCTATCAATTTAGGCGGGCATGCATATCAACT
TCTTTCACTGGAGTTGATGGAATAAATCGAGCTCAAGCAAAATTCTTTCTCCCTGAAATG
GATAAACTTTCAGCTGAAATAAGGGCTGGCTCTCTTGTCATCCTGTTTGTCAGCTTTGCT
GAACTTGCTAGAGATCATTTGGATACATCTTCATTTCCATTGAATCTTGAAGGGCACTGC
TTGTTGGGAAGAATGCCGATGGAATTACTTCATCTATTGTGGGAAAAGTCTCCCAATTTG
AGTTTAGGGGAGAGAGCTGAGATGTTGTCAACTGTTGACTTGAGCCCTTGTTTTATGAAG
GTACACTATTATTCTGAGATCCTTGATTTCTTCCTTGAGGAAAAAGAAACAATTCCCCCC
NGCAGTTCTGTGGCTCTGGCAACAATACAGCAGCTGCAAGTCAAAATAGCTGCAGAAGAA
GCTGGTGCTGGAGAAAAATCAGCTTATGATTCATTCTCCTATGATGACATTCCTACGACT
TCATTGCCTCGAATAATACGGTTGAGGACAGGAAATGTTGTCTTCAACTATAGGTACTAT
AACAACAAGTTGCAGAGAACAGAAGTGACTGAGGACTTCACATGTCCTCTCTGCTTGGTA
AAATGTGCCAGCTTTAAGGGTTTGAGATATCACTTATGCTCATCTCACGATTTGTTCAAC
TTTGAATTTTGGGTAAATGAAGAATATCAAGCTGTAAATGTATCTGTGAGAAGTGACATG
TGGAGATCTGAGATTGTTGCTAATGGCGTTGATCCTAAGCAACAAACATTCTTCTTTTGT
TCAAAGCCACTAAGACGGAGGAAACGACAGGATTTAGTTCAAAATTCAAAGTATGTGCAC
CCACTTGTTTTAGATTCAGAGTTCCCTACATCAACGAATGGGATCAATGACAAGATTAAT
GGCATTGCTGAGGCTGTAGAGTGTGATCCATCAAGTCCCAATGGTGCAGGCGTTTCCTCT
GCAACTGGTCACTTGTATCCAGATCCTGACTCTGTGCAATCAGTACCAGGAAGCACCCTT
GCACCCCCAGCACTGCTTCAGTTTGCCAAGTCAAGAAAGTTATCAGTTGAGCGCTCTGAT
CCCAGAAATCGTGCACTCCTGCAAAAAAGGCAATTCTTTCATTCTCATAGAGCCCAGCCC
ATGGCACTGGAGCAAGTTTTATCAGATCGAGACAGCGAGGATGAAGTTGATGATGATGTT
GCAGATCTTGAAGATCGAAGGATGCTTGATGATTTCGTGGATGTTACCAAAGATGAGAAG
CAAATGATGCATCTGTGGAACTCATTTGTTAGAAAGCAAAGGGTGTTGGCAGATGGTCAC
ATTCCTTGGGCATGTGAGGCTTTTTCAAAGCTGCATGGTGATGAGTTCGCCCGAGCACCG
GCCTTGTTGTGCTGCTGGAGATTATTCATGGTCAAACTGTGGAACCATGGTCTTATTGAT
GCGCGTGGAATCAACAATTGTAACCTAATACTAGAGCAATTCCAAAGCCAAGACAATGAT
TCTACTAGAAGCTGA

Peptide Sequence

PEP ID

XP_016435822.1
PEP Infomation

PREDICTED: polycomb group protein EMBRYONIC FLOWER 2-like [Nicotiana tabacum]
Sequence

MPGIPLVARETTHYTCYCSYSTVTDSMCRQDSATHLSAEEKIAAEESLSTYCKPVELYNI
LQRRAVRNPSFLQRCLQYKIQAKHKRRIQMAISVPATVNDESQVQNVFPLCVILARPVSN
AAGAEAHSAVYQFRRACISTSFTGVDGINRAQAKFFLPEMDKLSAEIRAGSLVILFVSFA
ELARDHLDTSSFPLNLEGHCLLGRMPMELLHLLWEKSPNLSLGERAEMLSTVDLSPCFMK
VHYYSEILDFFLEEKETIPPXSSVALATIQQLQVKIAAEEAGAGEKSAYDSFSYDDIPTT
SLPRIIRLRTGNVVFNYRYYNNKLQRTEVTEDFTCPLCLVKCASFKGLRYHLCSSHDLFN
FEFWVNEEYQAVNVSVRSDMWRSEIVANGVDPKQQTFFFCSKPLRRRKRQDLVQNSKYVH
PLVLDSEFPTSTNGINDKINGIAEAVECDPSSPNGAGVSSATGHLYPDPDSVQSVPGSTL
APPALLQFAKSRKLSVERSDPRNRALLQKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDV
ADLEDRRMLDDFVDVTKDEKQMMHLWNSFVRKQRVLADGHIPWACEAFSKLHGDEFARAP
ALLCCWRLFMVKLWNHGLIDARGINNCNLILEQFQSQDNDSTRS

Transcript Sequence

Gene sequence data has not been registered.